Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845267.1_cds_XP_016509277.1_22221
CDS Infomation

[gene=LOC107826766] [db_xref=GeneID:107826766] [protein=farnesylcysteine lyase] [protein_id=XP_016509277.1] [location=join(258..740,1703..1876,11220..11579,11725..11900,12921..13184,18062..18080)] [gbkey=CDS]
Sequence

ATGATGAAGAATCTCCGGTCAGCCATTAATGTTGTGGTTTTATCACTTGTACTCATCTCC
ACGGAATCATCTCCGACTGTCTGCATTATTGGCAGCGGAATCGGCGGCTCCTCCGTGGCG
CACTTCCTGCGGACCTATTCAAACTCCGAAATCGGCACAATCAGAATCTTCGAGCGGCAC
GAAGCTGTCGGAGGGCGCATGGCAACGGTGACTATTTCCGGCGAGACATTCGAGGCCGGT
GCCTCCATTCTTCACCCCAAGAACTACCACGCTTTGAATTACACTAAATATCTAAATCTC
TCCGTCCGACCTTCTGAATCTGATTCCTCATTTGGCATTTGGGATGGACGCGAGTTCGTT
TTCAAAACCTTCACCTCCCAATCGAAGCTCCCTATATTCCAAAGCATTGTGTCCTTCGCC
AATTCCATCTTGTTTTTCTTTCGCTATGGCTTCTCTCTGTTTCGCATGAACACCTTCGTT
GAGGGCACCGTGGACAGTTTCTTGAAGTATTATAAAAGTTTTGAGTCGCGGCCAGTATTT
GAGACTGTGGAAGAGATGCTTAAATGGTCCGGGCTTTACAATATGACGAAACAAACATTG
CAGGAGGAGTTACTAGATGCTGGTTTGTCTCCTCGACTCATTCAAGAACTTGTCATGGTT
ATCACAAGAATCAATTATGGGCAAAGTGTCAGCATCAGTGGACTTGCCGGTGCTGTATCT
TTGGCTGGAAGCACAAAAGGCTTATGGTCAGTTGAAGGAGGGAATCAGCAAATGGCTGCT
GGATTGATCAATCATTCAGATGTCAAATTGCACCTTAATGAAGAAGTAAAGTCAGTTTCT
TTCCTGGGGGGAAATTATCAACTCAATACCTCGAAAGGAAAGATTTACCCATGTGGAATA
ACAGTGGTTGGCACACCTTTAGATGAGCTGAAAATTCACTTTCTTCCAGAAATTTCAATA
CCTGAGAGGAAATTACAGCACACATATACAACTTTTGTTAGAGGTCTATTAAATCCTGCT
TATTTTGCGTTAGGTTCCATATCAGATATTCCAAAACTGGTGGGCACTGTCGAGACACCT
GACGTTCCTTTTTCAAGCATCTCAGTTATTAAGAAGCACAAGGACAATGATATGACATAC
AAGGTGTTTTCTCGAAGATCTCTTGATGATGCTTTATTAGATCAGATCTTCAGTGTCAGA
AATGAGACAGTCCGGATAGACTGGGCTGCATACCCGCACTATCATGCTCCTGAGGTATTT
GCACCCTTTATCTTGGATGGTCAGCACTTGTACTATGTGAATGCTTTTGAAAATGCAGCT
AGCACCATGGAAACTAGTGCTGTTGCTGGTGAAAATATCGCAAGGCTGATTCTTTCGAGA
CTTACTGGCCGAAAACACTTGAGTTCAGCGAAATTGGAAAGCTTTGGTGATGATGCATAT
GATGTGCATGCAGACTTGAGCAAGTCTTTATTATGA

Peptide Sequence

PEP ID

XP_016509277.1
PEP Infomation

PREDICTED: farnesylcysteine lyase [Nicotiana tabacum]
Sequence

MMKNLRSAINVVVLSLVLISTESSPTVCIIGSGIGGSSVAHFLRTYSNSEIGTIRIFERH
EAVGGRMATVTISGETFEAGASILHPKNYHALNYTKYLNLSVRPSESDSSFGIWDGREFV
FKTFTSQSKLPIFQSIVSFANSILFFFRYGFSLFRMNTFVEGTVDSFLKYYKSFESRPVF
ETVEEMLKWSGLYNMTKQTLQEELLDAGLSPRLIQELVMVITRINYGQSVSISGLAGAVS
LAGSTKGLWSVEGGNQQMAAGLINHSDVKLHLNEEVKSVSFLGGNYQLNTSKGKIYPCGI
TVVGTPLDELKIHFLPEISIPERKLQHTYTTFVRGLLNPAYFALGSISDIPKLVGTVETP
DVPFSSISVIKKHKDNDMTYKVFSRRSLDDALLDQIFSVRNETVRIDWAAYPHYHAPEVF
APFILDGQHLYYVNAFENAASTMETSAVAGENIARLILSRLTGRKHLSSAKLESFGDDAY
DVHADLSKSLL

Transcript Sequence

Gene sequence data has not been registered.